Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC009542.2-202ENST00000619004 1067 ntBASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 AL356585.2-201ENST00000625078 2396 ntBASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TTC9CQ8N5M4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 CYP4F23P-201ENST00000593402 1579 ntBASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AL139385.1-201ENST00000611744 3272 ntBASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 BNIP3P42-201ENST00000454982 569 ntBASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 BNIP3P29-201ENST00000598302 571 ntBASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AC239800.4-201ENST00000603712 296 ntBASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 BAP1-211ENST00000615113 489 ntBASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AC011447.5-201ENST00000616168 564 ntBASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TTC9CQ8N5M4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.59
TTC9CQ8N5M4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
TTC9CQ8N5M4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.33□□□□□ -0.59
TTC9CQ8N5M4 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 MBLAC2-202ENST00000514906 1936 ntBASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TTC9CQ8N5M4 HNRNPA1P63-201ENST00000427917 963 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms