Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MST1L-204ENST00000545160 559 ntTSL 4 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13CQ709C8 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13CQ709C8 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 AC015656.1-201ENST00000624209 3578 ntBASIC11.45□□□□□ -0.58
VPS13CQ709C8 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 MIR4326-201ENST00000582203 59 ntBASIC11.45□□□□□ -0.58
VPS13CQ709C8 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 AL591499.1-201ENST00000307155 1153 ntBASIC11.45□□□□□ -0.58
VPS13CQ709C8 RFNG-202ENST00000429557 994 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 AC092810.2-201ENST00000431570 362 ntBASIC11.45□□□□□ -0.58
VPS13CQ709C8 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC11.45□□□□□ -0.58
VPS13CQ709C8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13CQ709C8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 AC005562.1-201ENST00000583030 3219 ntBASIC11.44□□□□□ -0.58
VPS13CQ709C8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 OR2W2P-201ENST00000406313 909 ntBASIC11.44□□□□□ -0.58
VPS13CQ709C8 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 AC064850.1-201ENST00000413279 1398 ntBASIC11.44□□□□□ -0.58
VPS13CQ709C8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 RN7SL76P-201ENST00000482435 289 ntBASIC11.44□□□□□ -0.58
VPS13CQ709C8 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms