Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RN7SL134P-201ENST00000579756 303 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AC112220.4-201ENST00000604982 1263 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 LILRP2-202ENST00000413572 1383 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 TUBB8P4-201ENST00000511806 1324 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AC015802.1-201ENST00000588104 1449 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 RPL35P1-201ENST00000450819 370 ntBASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AK2-208ENST00000487289 920 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS13DQ5THJ4 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 THAP4-203ENST00000402545 833 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AC008267.3-201ENST00000448776 712 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 RN7SL672P-201ENST00000474091 317 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 MIR181D-201ENST00000384853 137 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 TPT1P9-201ENST00000413759 514 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AL954722.1-201ENST00000431238 259 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 DUX4L31-201ENST00000446466 1136 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AC093700.1-201ENST00000503348 717 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AL033381.2-201ENST00000603854 732 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 RN7SL47P-201ENST00000488710 299 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AC073869.1-201ENST00000415574 2762 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 CD37-203ENST00000426897 1204 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms