Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 USP17L6P-201ENST00000382470 1197 ntBASIC16■□□□□ 0.15
HERC4Q5GLZ8 AC234644.1-201ENST00000406065 370 ntBASIC16■□□□□ 0.15
HERC4Q5GLZ8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 VDAC1P1-201ENST00000439229 848 ntBASIC16■□□□□ 0.15
HERC4Q5GLZ8 AC022217.1-201ENST00000521069 738 ntBASIC16■□□□□ 0.15
HERC4Q5GLZ8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 AL645939.5-201ENST00000606834 243 ntBASIC16■□□□□ 0.15
HERC4Q5GLZ8 AC022748.3-201ENST00000621828 275 ntBASIC16■□□□□ 0.15
HERC4Q5GLZ8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HERC4Q5GLZ8 FAM90A7P-201ENST00000382628 1395 ntBASIC16■□□□□ 0.15
HERC4Q5GLZ8 FAM90A23P-201ENST00000400136 1395 ntBASIC16■□□□□ 0.15
HERC4Q5GLZ8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16■□□□□ 0.15
HERC4Q5GLZ8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 AC104073.2-201ENST00000453737 312 ntBASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 HLA-J-204ENST00000495278 958 ntBASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 RN7SL163P-201ENST00000583100 276 ntBASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 RN7SL736P-201ENST00000613111 269 ntBASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 AC004923.1-202ENST00000642106 209 ntBASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 AL359881.3-201ENST00000602640 1721 ntBASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HERC4Q5GLZ8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms