Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.11□□□□□ -0.15
CDKL1Q00532 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.11□□□□□ -0.15
CDKL1Q00532 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKL1Q00532 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 AC119751.2-201ENST00000504529 210 ntBASIC14.11□□□□□ -0.15
CDKL1Q00532 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.11□□□□□ -0.15
CDKL1Q00532 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDKL1Q00532 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.11□□□□□ -0.15
CDKL1Q00532 AC133552.6-201ENST00000613406 534 ntBASIC14.11□□□□□ -0.15
CDKL1Q00532 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKL1Q00532 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKL1Q00532 COX11-210ENST00000639671 696 ntBASIC14.11□□□□□ -0.15
CDKL1Q00532 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.1□□□□□ -0.15
CDKL1Q00532 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.1□□□□□ -0.15
CDKL1Q00532 KLF2P1-201ENST00000447438 1042 ntBASIC14.1□□□□□ -0.15
CDKL1Q00532 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.1□□□□□ -0.15
CDKL1Q00532 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.1□□□□□ -0.15
CDKL1Q00532 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 RNA5SP412-201ENST00000516234 123 ntBASIC14.1□□□□□ -0.15
CDKL1Q00532 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.1□□□□□ -0.15
CDKL1Q00532 AP000346.4-201ENST00000614827 381 ntBASIC14.1□□□□□ -0.15
CDKL1Q00532 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDKL1Q00532 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKL1Q00532 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKL1Q00532 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.09□□□□□ -0.15
CDKL1Q00532 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKL1Q00532 AL365181.3-201ENST00000605886 3222 ntBASIC14.09□□□□□ -0.15
CDKL1Q00532 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKL1Q00532 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKL1Q00532 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKL1Q00532 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CDKL1Q00532 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKL1Q00532 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.09□□□□□ -0.15
CDKL1Q00532 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.09□□□□□ -0.15
CDKL1Q00532 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDKL1Q00532 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CDKL1Q00532 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms