Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
RPL39P62891 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 AC022400.8-201ENST00000623453 3599 ntBASIC10.15□□□□□ -0.78
RPL39P62891 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RPL39P62891 ACTBP8-201ENST00000403258 1108 ntBASIC10.15□□□□□ -0.78
RPL39P62891 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC10.15□□□□□ -0.78
RPL39P62891 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 UPF3AP3-201ENST00000420996 769 ntBASIC10.15□□□□□ -0.78
RPL39P62891 TSEN15P1-201ENST00000423257 515 ntBASIC10.15□□□□□ -0.78
RPL39P62891 TSSK5P-201ENST00000423978 907 ntBASIC10.15□□□□□ -0.78
RPL39P62891 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.15□□□□□ -0.78
RPL39P62891 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC10.15□□□□□ -0.78
RPL39P62891 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC10.15□□□□□ -0.78
RPL39P62891 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC10.15□□□□□ -0.78
RPL39P62891 IGHV3-42-201ENST00000520410 361 ntBASIC10.15□□□□□ -0.78
RPL39P62891 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
RPL39P62891 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.15□□□□□ -0.78
RPL39P62891 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 SNHG9-202ENST00000564014 471 ntBASIC10.15□□□□□ -0.78
RPL39P62891 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.15□□□□□ -0.78
RPL39P62891 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC10.15□□□□□ -0.78
RPL39P62891 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.15□□□□□ -0.78
RPL39P62891 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RPL39P62891 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.15□□□□□ -0.78
RPL39P62891 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.15□□□□□ -0.78
RPL39P62891 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC10.15□□□□□ -0.79
RPL39P62891 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RPL39P62891 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
RPL39P62891 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RPL39P62891 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RPL39P62891 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
RPL39P62891 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RPL39P62891 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RPL39P62891 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RPL39P62891 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 RHPN1-AS1-201ENST00000518049 1918 ntBASIC10.14□□□□□ -0.79
RPL39P62891 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
RPL39P62891 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RPL39P62891 ARSEP1-201ENST00000420443 635 ntBASIC10.14□□□□□ -0.79
RPL39P62891 AC241585.1-201ENST00000433527 519 ntBASIC10.14□□□□□ -0.79
RPL39P62891 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 PUDPP3-201ENST00000445368 636 ntBASIC10.14□□□□□ -0.79
RPL39P62891 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.14□□□□□ -0.79
RPL39P62891 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC10.14□□□□□ -0.79
RPL39P62891 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.14□□□□□ -0.79
RPL39P62891 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.14□□□□□ -0.79
RPL39P62891 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms