Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
AP3S2P59780 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 AL358781.1-202ENST00000321081 1360 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 ARSEP1-201ENST00000420443 635 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 FAM58DP-201ENST00000428076 619 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 MKNK2P1-201ENST00000437526 628 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 AC114812.1-204ENST00000449669 728 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 RPL13AP25-201ENST00000484130 612 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 AC010336.2-201ENST00000564226 506 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 AC022145.2-201ENST00000598203 171 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 AL445228.2-201ENST00000605589 952 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
AP3S2P59780 FAM197Y3-203ENST00000618346 717 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 C20orf181-201ENST00000623918 480 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.31□□□□□ -0.44
AP3S2P59780 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 AC022400.8-201ENST00000623453 3599 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.31□□□□□ -0.44
AP3S2P59780 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.31□□□□□ -0.44
AP3S2P59780 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP3S2P59780 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP3S2P59780 AC027369.3-201ENST00000530465 3707 ntBASIC12.31□□□□□ -0.44
AP3S2P59780 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
AP3S2P59780 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S2P59780 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S2P59780 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
AP3S2P59780 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP3S2P59780 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
AP3S2P59780 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.3□□□□□ -0.44
AP3S2P59780 HLA-V-204ENST00000476601 1289 ntBASIC12.3□□□□□ -0.44
AP3S2P59780 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.3□□□□□ -0.44
AP3S2P59780 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.3□□□□□ -0.44
AP3S2P59780 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.3□□□□□ -0.44
AP3S2P59780 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.3□□□□□ -0.44
AP3S2P59780 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms