Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK7P50613 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK7P50613 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDK7P50613 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDK7P50613 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 PCDHA3-202ENST00000532566 4594 ntBASIC15.68■□□□□ 0.1
CDK7P50613 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
CDK7P50613 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
CDK7P50613 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
CDK7P50613 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.68■□□□□ 0.1
CDK7P50613 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.68■□□□□ 0.1
CDK7P50613 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.68■□□□□ 0.1
CDK7P50613 VENTXP3-201ENST00000546480 773 ntBASIC15.68■□□□□ 0.1
CDK7P50613 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.68■□□□□ 0.1
CDK7P50613 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.68■□□□□ 0.1
CDK7P50613 MIR4265-201ENST00000582152 99 ntBASIC15.68■□□□□ 0.1
CDK7P50613 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.68■□□□□ 0.1
CDK7P50613 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDK7P50613 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK7P50613 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK7P50613 KRT8P18-201ENST00000413425 1445 ntBASIC15.68■□□□□ 0.1
CDK7P50613 PDXDC2P-206ENST00000534700 1315 ntBASIC15.68■□□□□ 0.1
CDK7P50613 AC018442.1-201ENST00000421439 2061 ntBASIC15.67■□□□□ 0.1
CDK7P50613 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
CDK7P50613 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.67■□□□□ 0.1
CDK7P50613 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDK7P50613 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDK7P50613 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDK7P50613 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CDK7P50613 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
CDK7P50613 AL109809.1-201ENST00000418979 1367 ntBASIC15.67■□□□□ 0.1
CDK7P50613 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDK7P50613 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 OR7E115P-201ENST00000382617 1024 ntBASIC15.67■□□□□ 0.1
CDK7P50613 AP000354.1-201ENST00000396982 456 ntBASIC15.67■□□□□ 0.1
CDK7P50613 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDK7P50613 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.67■□□□□ 0.1
CDK7P50613 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDK7P50613 PRSS3P1-201ENST00000503996 742 ntBASIC15.67■□□□□ 0.1
CDK7P50613 KRT18P37-201ENST00000520711 1282 ntBASIC15.67■□□□□ 0.1
CDK7P50613 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDK7P50613 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.67■□□□□ 0.1
CDK7P50613 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.67■□□□□ 0.1
CDK7P50613 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.67■□□□□ 0.1
CDK7P50613 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.67■□□□□ 0.1
CDK7P50613 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.67■□□□□ 0.1
CDK7P50613 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDK7P50613 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDK7P50613 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms