Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBP50607 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBP50607 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
TUBP50607 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBP50607 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBP50607 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBP50607 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TUBP50607 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBP50607 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
TUBP50607 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 ELK2AP-201ENST00000392510 1007 ntBASIC15.1■□□□□ 0.01
TUBP50607 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.1■□□□□ 0.01
TUBP50607 AL161932.2-201ENST00000435436 679 ntBASIC15.1■□□□□ 0.01
TUBP50607 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TUBP50607 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.1■□□□□ 0.01
TUBP50607 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.1■□□□□ 0.01
TUBP50607 AC134698.3-201ENST00000523880 214 ntBASIC15.1■□□□□ 0.01
TUBP50607 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
TUBP50607 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.1■□□□□ 0.01
TUBP50607 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.1■□□□□ 0.01
TUBP50607 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBP50607 MEG3_2.1-201ENST00000611456 105 ntBASIC15.1■□□□□ 0.01
TUBP50607 AC006453.1-201ENST00000636037 1257 ntBASIC15.1■□□□□ 0.01
TUBP50607 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TUBP50607 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBP50607 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TUBP50607 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBP50607 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
TUBP50607 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
TUBP50607 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TUBP50607 AC067750.1-201ENST00000608826 6545 ntBASIC15.09■□□□□ 0.01
TUBP50607 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.09■□□□□ 0.01
TUBP50607 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TUBP50607 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TUBP50607 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TUBP50607 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.09■□□□□ 0.01
TUBP50607 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.09■□□□□ 0.01
TUBP50607 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 AC234782.1-201ENST00000451950 919 ntBASIC15.09■□□□□ 0.01
TUBP50607 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.09■□□□□ 0.01
TUBP50607 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBP50607 RTN3P1-201ENST00000536295 711 ntBASIC15.09■□□□□ 0.01
TUBP50607 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.09■□□□□ 0.01
TUBP50607 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TUBP50607 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.09■□□□□ 0.01
TUBP50607 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 AC021016.3-201ENST00000608367 477 ntBASIC15.09■□□□□ 0.01
TUBP50607 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.09■□□□□ 0.01
TUBP50607 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TUBP50607 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBP50607 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBP50607 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBP50607 AC064801.2-201ENST00000625052 1303 ntBASIC15.09■□□□□ 0.01
TUBP50607 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TUBP50607 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms