Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX5P48382 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX5P48382 AC079112.1-201ENST00000454972 939 ntBASIC17.26■□□□□ 0.35
RFX5P48382 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX5P48382 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 RNA5SP406-201ENST00000516106 112 ntBASIC17.26■□□□□ 0.35
RFX5P48382 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX5P48382 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.26■□□□□ 0.35
RFX5P48382 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX5P48382 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX5P48382 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RFX5P48382 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 NRADDP-202ENST00000641269 1585 ntBASIC17.26■□□□□ 0.35
RFX5P48382 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX5P48382 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFX5P48382 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX5P48382 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFX5P48382 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RFX5P48382 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.25■□□□□ 0.35
RFX5P48382 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX5P48382 AC018463.1-201ENST00000456674 917 ntBASIC17.25■□□□□ 0.35
RFX5P48382 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 RN7SL375P-201ENST00000492442 298 ntBASIC17.25■□□□□ 0.35
RFX5P48382 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.25■□□□□ 0.35
RFX5P48382 COQ10BP2-201ENST00000513804 724 ntBASIC17.25■□□□□ 0.35
RFX5P48382 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.25■□□□□ 0.35
RFX5P48382 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX5P48382 MIR4326-201ENST00000582203 59 ntBASIC17.25■□□□□ 0.35
RFX5P48382 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.25■□□□□ 0.35
RFX5P48382 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RFX5P48382 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX5P48382 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RFX5P48382 MIR7845-201ENST00000618396 99 ntBASIC17.25■□□□□ 0.35
RFX5P48382 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX5P48382 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX5P48382 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX5P48382 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX5P48382 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RFX5P48382 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX5P48382 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX5P48382 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX5P48382 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.24■□□□□ 0.35
RFX5P48382 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms