Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
RFC3P40938 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
RFC3P40938 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.16□□□□□ -0.3
RFC3P40938 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.16□□□□□ -0.3
RFC3P40938 FAM90A2P-201ENST00000511144 1395 ntBASIC13.16□□□□□ -0.3
RFC3P40938 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 FAM90A25P-201ENST00000528404 1395 ntBASIC13.16□□□□□ -0.3
RFC3P40938 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.16□□□□□ -0.3
RFC3P40938 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFC3P40938 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RFC3P40938 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.15□□□□□ -0.3
RFC3P40938 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RFC3P40938 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RFC3P40938 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 TCAF1P1-201ENST00000414990 2232 ntBASIC13.15□□□□□ -0.3
RFC3P40938 AC099521.3-201ENST00000624251 2938 ntBASIC13.15□□□□□ -0.3
RFC3P40938 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
RFC3P40938 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.15□□□□□ -0.3
RFC3P40938 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.15□□□□□ -0.3
RFC3P40938 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 AC019193.1-201ENST00000506678 823 ntBASIC13.15□□□□□ -0.3
RFC3P40938 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 MIR3677-201ENST00000578964 60 ntBASIC13.15□□□□□ -0.3
RFC3P40938 MIR5572-201ENST00000583188 137 ntBASIC13.15□□□□□ -0.3
RFC3P40938 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.15□□□□□ -0.3
RFC3P40938 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 U62317.3-201ENST00000608319 855 ntBASIC13.15□□□□□ -0.3
RFC3P40938 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RFC3P40938 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.15□□□□□ -0.3
RFC3P40938 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.15□□□□□ -0.3
RFC3P40938 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RFC3P40938 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFC3P40938 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
RFC3P40938 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
RFC3P40938 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
RFC3P40938 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RFC3P40938 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.15□□□□□ -0.31
RFC3P40938 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RFC3P40938 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RFC3P40938 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RFC3P40938 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.14□□□□□ -0.31
RFC3P40938 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.14□□□□□ -0.31
RFC3P40938 AC215219.1-201ENST00000400706 1817 ntBASIC13.14□□□□□ -0.31
RFC3P40938 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RFC3P40938 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.14□□□□□ -0.31
RFC3P40938 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFC3P40938 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.14□□□□□ -0.31
RFC3P40938 ST13P19-201ENST00000442505 1124 ntBASIC13.14□□□□□ -0.31
RFC3P40938 MPRIPP1-201ENST00000452433 1089 ntBASIC13.14□□□□□ -0.31
RFC3P40938 RPS2P36-201ENST00000456516 831 ntBASIC13.14□□□□□ -0.31
RFC3P40938 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms