Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MME-218ENST00000625667 363 ntTSL 5 BASIC18.77■□□□□ 0.6
USP6P35125 BX322534.1-201ENST00000635574 241 ntBASIC18.77■□□□□ 0.6
USP6P35125 AC215524.1-201ENST00000635696 241 ntBASIC18.77■□□□□ 0.6
USP6P35125 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC18.77■□□□□ 0.6
USP6P35125 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
USP6P35125 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP6P35125 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP6P35125 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP6P35125 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC18.77■□□□□ 0.59
USP6P35125 AC090643.2-201ENST00000623442 2029 ntBASIC18.77■□□□□ 0.59
USP6P35125 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC18.76■□□□□ 0.59
USP6P35125 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 PRMT1P1-201ENST00000604252 1009 ntBASIC18.76■□□□□ 0.59
USP6P35125 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.76■□□□□ 0.59
USP6P35125 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP6P35125 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
USP6P35125 LINC00552-201ENST00000625151 2579 ntBASIC18.76■□□□□ 0.59
USP6P35125 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
USP6P35125 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.76■□□□□ 0.59
USP6P35125 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.76■□□□□ 0.59
USP6P35125 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6P35125 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
USP6P35125 AC016397.2-201ENST00000624848 1985 ntBASIC18.76■□□□□ 0.59
USP6P35125 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 AC112250.1-201ENST00000504640 745 ntBASIC18.75■□□□□ 0.59
USP6P35125 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 AL590235.1-201ENST00000564650 861 ntBASIC18.75■□□□□ 0.59
USP6P35125 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC18.75■□□□□ 0.59
USP6P35125 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC18.75■□□□□ 0.59
USP6P35125 KRT8P34-201ENST00000577607 1044 ntBASIC18.75■□□□□ 0.59
USP6P35125 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 AL591424.3-201ENST00000614278 872 ntBASIC18.75■□□□□ 0.59
USP6P35125 PLS3-210ENST00000626746 216 ntTSL 4 BASIC18.75■□□□□ 0.59
USP6P35125 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC18.75■□□□□ 0.59
USP6P35125 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 ENPP7P8-202ENST00000527856 1345 ntBASIC18.75■□□□□ 0.59
USP6P35125 AC020931.1-201ENST00000589622 1346 ntBASIC18.75■□□□□ 0.59
USP6P35125 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.75■□□□□ 0.59
USP6P35125 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 AC064850.1-201ENST00000413279 1398 ntBASIC18.75■□□□□ 0.59
USP6P35125 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 AC024075.2-201ENST00000598112 1473 ntBASIC18.75■□□□□ 0.59
USP6P35125 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USP6P35125 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.75■□□□□ 0.59
USP6P35125 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 DDC-213ENST00000617822 1809 ntTSL 3 BASIC18.75■□□□□ 0.59
USP6P35125 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 TCAM1P-207ENST00000485295 1537 ntBASIC18.75■□□□□ 0.59
USP6P35125 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6P35125 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6P35125 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
USP6P35125 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
USP6P35125 PHBP10-201ENST00000416467 784 ntBASIC18.74■□□□□ 0.59
USP6P35125 AC005077.3-201ENST00000449614 213 ntBASIC18.74■□□□□ 0.59
USP6P35125 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC18.74■□□□□ 0.59
USP6P35125 AC079414.2-201ENST00000567157 1104 ntBASIC18.74■□□□□ 0.59
USP6P35125 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms