Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
XPAP23025 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
XPAP23025 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.46□□□□□ -0.1
XPAP23025 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
XPAP23025 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.46□□□□□ -0.1
XPAP23025 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.46□□□□□ -0.1
XPAP23025 AC139749.1-202ENST00000617529 3139 ntBASIC14.46□□□□□ -0.1
XPAP23025 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
XPAP23025 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
XPAP23025 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.45□□□□□ -0.1
XPAP23025 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
XPAP23025 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.45□□□□□ -0.1
XPAP23025 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
XPAP23025 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.45□□□□□ -0.1
XPAP23025 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.45□□□□□ -0.1
XPAP23025 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.45□□□□□ -0.1
XPAP23025 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.45□□□□□ -0.1
XPAP23025 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.45□□□□□ -0.1
XPAP23025 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.45□□□□□ -0.1
XPAP23025 AC104506.1-201ENST00000609247 429 ntBASIC14.45□□□□□ -0.1
XPAP23025 AC097724.1-201ENST00000609581 426 ntBASIC14.45□□□□□ -0.1
XPAP23025 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 AL353770.1-201ENST00000614915 403 ntBASIC14.45□□□□□ -0.1
XPAP23025 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
XPAP23025 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.45□□□□□ -0.1
XPAP23025 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.45□□□□□ -0.1
XPAP23025 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
XPAP23025 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.45□□□□□ -0.1
XPAP23025 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
XPAP23025 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
XPAP23025 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
XPAP23025 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.44□□□□□ -0.1
XPAP23025 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.44□□□□□ -0.1
XPAP23025 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.44□□□□□ -0.1
XPAP23025 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.44□□□□□ -0.1
XPAP23025 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
XPAP23025 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 C8orf49-201ENST00000525043 1968 ntBASIC14.44□□□□□ -0.1
XPAP23025 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.44□□□□□ -0.1
XPAP23025 PDIA3P2-201ENST00000428073 158 ntBASIC14.44□□□□□ -0.1
XPAP23025 AC092580.1-201ENST00000433998 658 ntBASIC14.44□□□□□ -0.1
XPAP23025 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.44□□□□□ -0.1
XPAP23025 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.44□□□□□ -0.1
XPAP23025 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
XPAP23025 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.44□□□□□ -0.1
XPAP23025 RN7SL574P-201ENST00000581512 297 ntBASIC14.44□□□□□ -0.1
XPAP23025 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.44□□□□□ -0.1
XPAP23025 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.44□□□□□ -0.1
XPAP23025 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.44□□□□□ -0.1
XPAP23025 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.44□□□□□ -0.1
XPAP23025 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.44□□□□□ -0.1
XPAP23025 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.44□□□□□ -0.1
XPAP23025 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
XPAP23025 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
XPAP23025 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
XPAP23025 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
XPAP23025 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XPAP23025 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
XPAP23025 KRT18P9-201ENST00000604826 1300 ntBASIC14.43□□□□□ -0.1
XPAP23025 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XPAP23025 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XPAP23025 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
XPAP23025 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XPAP23025 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.43□□□□□ -0.1
XPAP23025 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms