Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 CICP1-201ENST00000416803 2410 ntBASIC12.59□□□□□ -0.39
ATF1P18846 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.59□□□□□ -0.39
ATF1P18846 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 AL355864.2-201ENST00000447420 863 ntBASIC12.59□□□□□ -0.39
ATF1P18846 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 AC011495.1-201ENST00000498085 584 ntBASIC12.59□□□□□ -0.39
ATF1P18846 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.59□□□□□ -0.39
ATF1P18846 AC106760.1-201ENST00000508690 800 ntBASIC12.59□□□□□ -0.39
ATF1P18846 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.59□□□□□ -0.39
ATF1P18846 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 SPCS2P1-201ENST00000561636 679 ntBASIC12.59□□□□□ -0.39
ATF1P18846 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.59□□□□□ -0.39
ATF1P18846 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.59□□□□□ -0.39
ATF1P18846 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
ATF1P18846 RPSAP52-203ENST00000622976 1023 ntBASIC12.59□□□□□ -0.39
ATF1P18846 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
ATF1P18846 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
ATF1P18846 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.58□□□□□ -0.39
ATF1P18846 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
ATF1P18846 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ATF1P18846 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ATF1P18846 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ATF1P18846 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ATF1P18846 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 AC092053.3-201ENST00000641308 4975 ntBASIC12.58□□□□□ -0.4
ATF1P18846 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 KRT8P28-201ENST00000433288 1390 ntBASIC12.58□□□□□ -0.4
ATF1P18846 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.58□□□□□ -0.4
ATF1P18846 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ATF1P18846 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.58□□□□□ -0.4
ATF1P18846 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ATF1P18846 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ATF1P18846 AC073869.1-201ENST00000415574 2762 ntBASIC12.58□□□□□ -0.4
ATF1P18846 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATF1P18846 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.58□□□□□ -0.4
ATF1P18846 AP001889.1-201ENST00000525414 633 ntBASIC12.58□□□□□ -0.4
ATF1P18846 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.58□□□□□ -0.4
ATF1P18846 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms