Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.68■□□□□ 0.1
CLTAP09496 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CLTAP09496 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLTAP09496 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLTAP09496 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 DGCR9-201ENST00000609630 2415 ntBASIC15.67■□□□□ 0.1
CLTAP09496 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 AC020910.6-201ENST00000623084 1459 ntBASIC15.67■□□□□ 0.1
CLTAP09496 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.67■□□□□ 0.1
CLTAP09496 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.67■□□□□ 0.1
CLTAP09496 POU5F1P2-201ENST00000521750 823 ntBASIC15.67■□□□□ 0.1
CLTAP09496 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CLTAP09496 LINC01165-201ENST00000445190 1623 ntBASIC15.67■□□□□ 0.1
CLTAP09496 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.67■□□□□ 0.1
CLTAP09496 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLTAP09496 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CLTAP09496 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.66■□□□□ 0.1
CLTAP09496 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.66■□□□□ 0.1
CLTAP09496 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.66■□□□□ 0.1
CLTAP09496 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.66■□□□□ 0.1
CLTAP09496 AC092580.1-201ENST00000433998 658 ntBASIC15.66■□□□□ 0.1
CLTAP09496 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.66■□□□□ 0.1
CLTAP09496 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.66■□□□□ 0.1
CLTAP09496 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.66■□□□□ 0.1
CLTAP09496 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.66■□□□□ 0.1
CLTAP09496 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CLTAP09496 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.66■□□□□ 0.1
CLTAP09496 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.66■□□□□ 0.1
CLTAP09496 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.66■□□□□ 0.1
CLTAP09496 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.66■□□□□ 0.1
CLTAP09496 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CLTAP09496 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLTAP09496 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLTAP09496 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLTAP09496 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLTAP09496 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLTAP09496 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CLTAP09496 FRMPD2B-201ENST00000431305 1347 ntBASIC15.66■□□□□ 0.1
CLTAP09496 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms