Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.54□□□□□ -0.4
SFTPBP07988 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.54□□□□□ -0.4
SFTPBP07988 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SFTPBP07988 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SFTPBP07988 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
SFTPBP07988 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.54□□□□□ -0.4
SFTPBP07988 AC099336.1-201ENST00000417053 1171 ntBASIC12.54□□□□□ -0.4
SFTPBP07988 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.54□□□□□ -0.4
SFTPBP07988 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SFTPBP07988 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.54□□□□□ -0.4
SFTPBP07988 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.54□□□□□ -0.4
SFTPBP07988 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.54□□□□□ -0.4
SFTPBP07988 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.54□□□□□ -0.4
SFTPBP07988 AP001002.3-201ENST00000623482 206 ntBASIC12.54□□□□□ -0.4
SFTPBP07988 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.54□□□□□ -0.4
SFTPBP07988 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SFTPBP07988 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.54□□□□□ -0.4
SFTPBP07988 FKBP4P6-201ENST00000457486 1332 ntBASIC12.54□□□□□ -0.4
SFTPBP07988 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.54□□□□□ -0.4
SFTPBP07988 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.54□□□□□ -0.4
SFTPBP07988 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SFTPBP07988 HSPA8P5-201ENST00000456928 2069 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.53□□□□□ -0.4
SFTPBP07988 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
SFTPBP07988 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SFTPBP07988 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.53□□□□□ -0.4
SFTPBP07988 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.53□□□□□ -0.4
SFTPBP07988 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 HLA-V-201ENST00000429037 534 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.53□□□□□ -0.4
SFTPBP07988 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 AL391280.1-201ENST00000506969 1062 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.53□□□□□ -0.4
SFTPBP07988 AC025279.2-201ENST00000569730 653 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 RN7SL48P-201ENST00000579283 293 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 AC073869.1-201ENST00000415574 2762 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.53□□□□□ -0.4
SFTPBP07988 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.53□□□□□ -0.4
SFTPBP07988 PTPRVP-205ENST00000641549 5067 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SFTPBP07988 AC009093.2-202ENST00000620513 2079 ntBASIC12.53□□□□□ -0.4
SFTPBP07988 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms