Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC089987.1-201ENST00000551654 2209 ntBASIC12.76□□□□□ -0.37
APOC1P02654 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 USP17L6P-201ENST00000382470 1197 ntBASIC12.75□□□□□ -0.37
APOC1P02654 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.75□□□□□ -0.37
APOC1P02654 FAM197Y7-201ENST00000432892 766 ntBASIC12.75□□□□□ -0.37
APOC1P02654 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.75□□□□□ -0.37
APOC1P02654 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 INE1-201ENST00000456273 945 ntBASIC12.75□□□□□ -0.37
APOC1P02654 HSPA8P5-201ENST00000456928 2069 ntBASIC12.75□□□□□ -0.37
APOC1P02654 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 FTH1P14-201ENST00000482930 551 ntBASIC12.75□□□□□ -0.37
APOC1P02654 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.75□□□□□ -0.37
APOC1P02654 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.75□□□□□ -0.37
APOC1P02654 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
APOC1P02654 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 AC079316.1-201ENST00000548397 411 ntBASIC12.75□□□□□ -0.37
APOC1P02654 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.75□□□□□ -0.37
APOC1P02654 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.75□□□□□ -0.37
APOC1P02654 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.75□□□□□ -0.37
APOC1P02654 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.75□□□□□ -0.37
APOC1P02654 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.75□□□□□ -0.37
APOC1P02654 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.75□□□□□ -0.37
APOC1P02654 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.75□□□□□ -0.37
APOC1P02654 AC015909.5-201ENST00000624336 2266 ntBASIC12.75□□□□□ -0.37
APOC1P02654 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC1P02654 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOC1P02654 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC1P02654 AC012617.1-204ENST00000586340 2305 ntBASIC12.74□□□□□ -0.37
APOC1P02654 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 AC009093.2-202ENST00000620513 2079 ntBASIC12.74□□□□□ -0.37
APOC1P02654 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APOC1P02654 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 AC006001.1-201ENST00000325130 474 ntBASIC12.74□□□□□ -0.37
APOC1P02654 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.74□□□□□ -0.37
APOC1P02654 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.74□□□□□ -0.37
APOC1P02654 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC1P02654 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
APOC1P02654 AL161932.2-201ENST00000435436 679 ntBASIC12.74□□□□□ -0.37
APOC1P02654 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.74□□□□□ -0.37
APOC1P02654 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.74□□□□□ -0.37
APOC1P02654 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC1P02654 KRT90P-201ENST00000549264 1064 ntBASIC12.74□□□□□ -0.37
APOC1P02654 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms