Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.03■□□□□ -0
OPHN1O60890 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.03■□□□□ -0
OPHN1O60890 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.03■□□□□ -0
OPHN1O60890 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.03■□□□□ -0
OPHN1O60890 AP003171.2-201ENST00000528208 925 ntBASIC15.03■□□□□ -0
OPHN1O60890 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.03■□□□□ -0
OPHN1O60890 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
OPHN1O60890 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.03■□□□□ -0
OPHN1O60890 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.03■□□□□ -0
OPHN1O60890 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
OPHN1O60890 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.03■□□□□ -0
OPHN1O60890 AC002472.3-201ENST00000640124 621 ntBASIC15.03■□□□□ -0
OPHN1O60890 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.03■□□□□ -0
OPHN1O60890 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.03■□□□□ -0
OPHN1O60890 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 DGCR9-201ENST00000609630 2415 ntBASIC15.03■□□□□ -0
OPHN1O60890 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.03■□□□□ -0
OPHN1O60890 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
OPHN1O60890 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.02■□□□□ -0
OPHN1O60890 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
OPHN1O60890 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
OPHN1O60890 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
OPHN1O60890 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.02■□□□□ -0
OPHN1O60890 PPY2P-201ENST00000582808 702 ntBASIC15.02■□□□□ -0
OPHN1O60890 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.02■□□□□ -0
OPHN1O60890 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
OPHN1O60890 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.02■□□□□ -0
OPHN1O60890 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.02□□□□□ -0.01
OPHN1O60890 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.02□□□□□ -0.01
OPHN1O60890 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
OPHN1O60890 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
OPHN1O60890 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
OPHN1O60890 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.02□□□□□ -0.01
OPHN1O60890 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.02□□□□□ -0.01
OPHN1O60890 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
OPHN1O60890 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
OPHN1O60890 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
OPHN1O60890 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
OPHN1O60890 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
OPHN1O60890 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
OPHN1O60890 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OPHN1O60890 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OPHN1O60890 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
OPHN1O60890 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OPHN1O60890 KRT8P28-201ENST00000433288 1390 ntBASIC15.01□□□□□ -0.01
OPHN1O60890 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
OPHN1O60890 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OPHN1O60890 AC011474.4-201ENST00000623523 2076 ntBASIC15.01□□□□□ -0.01
OPHN1O60890 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OPHN1O60890 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
OPHN1O60890 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OPHN1O60890 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
OPHN1O60890 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms