Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.25■□□□□ 0.03
O00370 EIF4HP1-201ENST00000453115 687 ntBASIC15.25■□□□□ 0.03
O00370 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.25■□□□□ 0.03
O00370 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.25■□□□□ 0.03
O00370 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.25■□□□□ 0.03
O00370 AC140658.4-201ENST00000561990 352 ntBASIC15.25■□□□□ 0.03
O00370 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.25■□□□□ 0.03
O00370 AC020914.3-201ENST00000594712 304 ntBASIC15.25■□□□□ 0.03
O00370 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.25■□□□□ 0.03
O00370 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.25■□□□□ 0.03
O00370 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.25■□□□□ 0.03
O00370 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
O00370 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
O00370 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.25■□□□□ 0.03
O00370 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
O00370 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
O00370 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.25■□□□□ 0.03
O00370 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
O00370 AL591122.2-201ENST00000624125 1853 ntBASIC15.25■□□□□ 0.03
O00370 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
O00370 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
O00370 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
O00370 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.24■□□□□ 0.03
O00370 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.24■□□□□ 0.03
O00370 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.24■□□□□ 0.03
O00370 RN7SKP214-201ENST00000364208 315 ntBASIC15.24■□□□□ 0.03
O00370 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.24■□□□□ 0.03
O00370 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.24■□□□□ 0.03
O00370 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.24■□□□□ 0.03
O00370 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.24■□□□□ 0.03
O00370 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.24■□□□□ 0.03
O00370 SCARNA20.5-201ENST00000516991 142 ntBASIC15.24■□□□□ 0.03
O00370 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.24■□□□□ 0.03
O00370 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.24■□□□□ 0.03
O00370 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.24■□□□□ 0.03
O00370 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.24■□□□□ 0.03
O00370 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.24■□□□□ 0.03
O00370 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.24■□□□□ 0.03
O00370 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 GPR182-203ENST00000622922 591 ntBASIC15.24■□□□□ 0.03
O00370 AC244452.3-201ENST00000636814 210 ntBASIC15.24■□□□□ 0.03
O00370 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.24■□□□□ 0.03
O00370 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.24■□□□□ 0.03
O00370 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
O00370 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
O00370 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
O00370 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 FAM90A12P-201ENST00000519497 2375 ntBASIC15.24■□□□□ 0.03
O00370 FAM90A24P-201ENST00000520792 2369 ntBASIC15.24■□□□□ 0.03
O00370 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.24■□□□□ 0.03
O00370 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
O00370 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
O00370 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
O00370 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 TUBBP5-203ENST00000508529 1334 ntBASIC15.23■□□□□ 0.03
O00370 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.23■□□□□ 0.03
O00370 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.23■□□□□ 0.03
O00370 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.23■□□□□ 0.03
O00370 AC138028.6-201ENST00000616106 1482 ntBASIC15.23■□□□□ 0.03
O00370 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
O00370 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.23■□□□□ 0.03
O00370 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.23■□□□□ 0.03
O00370 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
O00370 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.23■□□□□ 0.03
O00370 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
O00370 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.23■□□□□ 0.03
O00370 TSPY25P-201ENST00000429463 745 ntBASIC15.23■□□□□ 0.03
O00370 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.23■□□□□ 0.03
O00370 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms