Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 AL022328.1-201ENST00000610050 478 ntBASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 BAP1-211ENST00000615113 489 ntBASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 AC092933.1-201ENST00000393644 945 ntBASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 AL355864.2-201ENST00000447420 863 ntBASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 FAM8A2P-201ENST00000528813 1142 ntBASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 AC009093.10-201ENST00000641956 1442 ntBASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 CICP1-201ENST00000416803 2410 ntBASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AMBRA1Q9C0C7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
AMBRA1Q9C0C7 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms