Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AC004890.2-204ENST00000481968 304 ntBASIC11.66□□□□□ -0.54
RAB40CQ96S21 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 MESTP3-201ENST00000503460 968 ntBASIC11.66□□□□□ -0.54
RAB40CQ96S21 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AC009407.1-201ENST00000568958 598 ntBASIC11.66□□□□□ -0.54
RAB40CQ96S21 AC027796.2-201ENST00000575326 344 ntBASIC11.66□□□□□ -0.54
RAB40CQ96S21 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AC005498.2-205ENST00000593218 784 ntBASIC11.66□□□□□ -0.54
RAB40CQ96S21 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AC125807.2-201ENST00000513358 3514 ntBASIC11.66□□□□□ -0.54
RAB40CQ96S21 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 AC022144.1-201ENST00000602255 1580 ntBASIC11.66□□□□□ -0.54
RAB40CQ96S21 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 KRT8P28-201ENST00000433288 1390 ntBASIC11.66□□□□□ -0.54
RAB40CQ96S21 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
RAB40CQ96S21 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB40CQ96S21 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 LINC01165-201ENST00000445190 1623 ntBASIC11.65□□□□□ -0.54
RAB40CQ96S21 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 AL445250.1-201ENST00000641671 2259 ntBASIC11.65□□□□□ -0.54
RAB40CQ96S21 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 SOCS2P1-201ENST00000417727 557 ntBASIC11.65□□□□□ -0.54
RAB40CQ96S21 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.65□□□□□ -0.54
RAB40CQ96S21 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms