Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 AL008718.2-201ENST00000609206 1313 ntBASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 AC115284.2-201ENST00000624646 2054 ntBASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHAMP1Q96JM3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 AL355102.3-201ENST00000554299 1678 ntBASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 MIR658-201ENST00000385210 100 ntBASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 RN7SL837P-201ENST00000463010 287 ntBASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 FTH1P14-201ENST00000482930 551 ntBASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 PDIA3P1-201ENST00000471856 1510 ntBASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHAMP1Q96JM3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHAMP1Q96JM3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 AL645933.1-201ENST00000440087 609 ntBASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 KLF2P1-201ENST00000447438 1042 ntBASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 USP32P1-208ENST00000506594 1164 ntBASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 RNA5SP486-201ENST00000515961 83 ntBASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 MIR4525-201ENST00000580000 75 ntBASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CHAMP1Q96JM3 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms