Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 AC015818.8-201ENST00000587907 1519 ntBASIC12.54□□□□□ -0.4
CPNE2Q96FN4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 API5-211ENST00000534695 560 ntTSL 5 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 AC006538.3-201ENST00000612495 578 ntBASIC12.54□□□□□ -0.4
CPNE2Q96FN4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CPNE2Q96FN4 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AC020910.5-201ENST00000623668 1865 ntBASIC12.53□□□□□ -0.4
CPNE2Q96FN4 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AC011481.3-201ENST00000623895 5594 ntBASIC12.53□□□□□ -0.4
CPNE2Q96FN4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 CTBP2P3-201ENST00000585629 1255 ntBASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 GPALPP1-207ENST00000611650 899 ntBASIC12.53□□□□□ -0.4
CPNE2Q96FN4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.53□□□□□ -0.4
CPNE2Q96FN4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CPNE2Q96FN4 KRT8P28-201ENST00000433288 1390 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms