Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TM9SF4Q92544 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.58□□□□□ -0.23
TM9SF4Q92544 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TM9SF4Q92544 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TM9SF4Q92544 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
TM9SF4Q92544 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.58□□□□□ -0.23
TM9SF4Q92544 AC126335.2-201ENST00000623362 4637 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 AC105206.1-202ENST00000314927 2368 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 VDAC1P1-201ENST00000439229 848 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 NOC2LP1-201ENST00000450578 752 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 AC008267.1-201ENST00000474858 1069 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 AC242376.1-201ENST00000559033 726 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 MIR4783-201ENST00000580343 82 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 AL133499.1-201ENST00000596207 608 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 COX6A1P2-201ENST00000620597 330 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 AL354702.1-201ENST00000442006 1960 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 DGCR9-201ENST00000609630 2415 ntBASIC13.58□□□□□ -0.24
TM9SF4Q92544 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TM9SF4Q92544 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TM9SF4Q92544 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 AC003102.2-201ENST00000589195 1469 ntBASIC13.57□□□□□ -0.24
TM9SF4Q92544 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.57□□□□□ -0.24
TM9SF4Q92544 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 PDIA3P2-201ENST00000428073 158 ntBASIC13.57□□□□□ -0.24
TM9SF4Q92544 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 LDHBP1-201ENST00000455730 1119 ntBASIC13.57□□□□□ -0.24
TM9SF4Q92544 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 AC005962.1-201ENST00000584100 773 ntBASIC13.57□□□□□ -0.24
TM9SF4Q92544 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 BX088702.1-201ENST00000610784 235 ntBASIC13.57□□□□□ -0.24
TM9SF4Q92544 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms