Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
BEST4Q8NFU0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC024075.2-201ENST00000598112 1473 ntBASIC12.42□□□□□ -0.42
BEST4Q8NFU0 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC092580.3-201ENST00000430932 139 ntBASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AP006288.1-201ENST00000446065 395 ntBASIC12.42□□□□□ -0.42
BEST4Q8NFU0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 RN7SL399P-201ENST00000471648 279 ntBASIC12.42□□□□□ -0.42
BEST4Q8NFU0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC131206.1-201ENST00000538078 1211 ntBASIC12.42□□□□□ -0.42
BEST4Q8NFU0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC025678.2-201ENST00000562061 970 ntBASIC12.42□□□□□ -0.42
BEST4Q8NFU0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC007431.3-201ENST00000623221 587 ntBASIC12.42□□□□□ -0.42
BEST4Q8NFU0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BEST4Q8NFU0 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 AL928654.5-201ENST00000624831 2501 ntBASIC12.41□□□□□ -0.42
BEST4Q8NFU0 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BEST4Q8NFU0 RNU1-114P-201ENST00000365297 166 ntBASIC12.41□□□□□ -0.42
BEST4Q8NFU0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms