Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 NOC2LP1-201ENST00000450578 752 ntBASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 AC138894.2-201ENST00000602838 371 ntBASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 SPCS2P2-201ENST00000603270 608 ntBASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3CQ6NXT2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 KRT17P5-201ENST00000332088 839 ntBASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 FXNP2-201ENST00000411625 547 ntBASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AL807761.2-201ENST00000422849 729 ntBASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 FTH1P22-201ENST00000456305 520 ntBASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 RN7SL277P-201ENST00000481521 288 ntBASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 NDUFS6P1-201ENST00000485187 316 ntBASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AC018635.2-201ENST00000608625 364 ntBASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 MARK2P16-201ENST00000605714 1723 ntBASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3CQ6NXT2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms