Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
RIF1Q5UIP0 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 HLA-W-207ENST00000439514 771 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 NEMF-210ENST00000556672 590 ntTSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC132825.4-202ENST00000578792 434 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC091691.1-201ENST00000583587 1018 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 MEP1AP1-201ENST00000636082 1097 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC064850.1-201ENST00000413279 1398 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC010086.2-201ENST00000428616 226 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC012513.2-201ENST00000441511 1137 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AACSP1-202ENST00000521412 1095 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC026120.2-201ENST00000617239 309 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 CDIPT-AS1-203ENST00000638164 713 ntBASIC13.59□□□□□ -0.23
RIF1Q5UIP0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RIF1Q5UIP0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 TUBB2BP1-201ENST00000404155 871 ntBASIC13.58□□□□□ -0.23
RIF1Q5UIP0 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 KRT18P42-201ENST00000505048 1255 ntBASIC13.58□□□□□ -0.23
RIF1Q5UIP0 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 OR4A49P-201ENST00000527050 632 ntBASIC13.58□□□□□ -0.23
RIF1Q5UIP0 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
RIF1Q5UIP0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RIF1Q5UIP0 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms