Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.65□□□□□ -0.38
SEC61A1P61619 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.65□□□□□ -0.38
SEC61A1P61619 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC009542.2-202ENST00000619004 1067 ntBASIC12.65□□□□□ -0.38
SEC61A1P61619 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 TCAM1P-207ENST00000485295 1537 ntBASIC12.65□□□□□ -0.38
SEC61A1P61619 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC073869.1-201ENST00000415574 2762 ntBASIC12.65□□□□□ -0.38
SEC61A1P61619 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SEC61A1P61619 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.39
SEC61A1P61619 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SEC61A1P61619 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.65□□□□□ -0.39
SEC61A1P61619 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SEC61A1P61619 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SEC61A1P61619 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SEC61A1P61619 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
SEC61A1P61619 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SEC61A1P61619 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.64□□□□□ -0.39
SEC61A1P61619 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SEC61A1P61619 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 AL137783.1-201ENST00000623494 1896 ntBASIC12.64□□□□□ -0.39
SEC61A1P61619 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
SEC61A1P61619 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 AL645937.2-201ENST00000396808 931 ntBASIC12.64□□□□□ -0.39
SEC61A1P61619 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.64□□□□□ -0.39
SEC61A1P61619 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.64□□□□□ -0.39
SEC61A1P61619 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.64□□□□□ -0.39
SEC61A1P61619 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.64□□□□□ -0.39
SEC61A1P61619 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.64□□□□□ -0.39
SEC61A1P61619 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.64□□□□□ -0.39
SEC61A1P61619 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.64□□□□□ -0.39
SEC61A1P61619 STRCP1-201ENST00000509801 5328 ntBASIC12.64□□□□□ -0.39
SEC61A1P61619 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.64□□□□□ -0.39
SEC61A1P61619 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
SEC61A1P61619 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SEC61A1P61619 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.64□□□□□ -0.39
SEC61A1P61619 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61A1P61619 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SEC61A1P61619 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SEC61A1P61619 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61A1P61619 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SEC61A1P61619 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms