Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S2P59780 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.43
AP3S2P59780 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AP3S2P59780 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.33□□□□□ -0.43
AP3S2P59780 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AP3S2P59780 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AP3S2P59780 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
AP3S2P59780 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.33□□□□□ -0.44
AP3S2P59780 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
AP3S2P59780 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.33□□□□□ -0.44
AP3S2P59780 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.33□□□□□ -0.44
AP3S2P59780 AL161932.2-201ENST00000435436 679 ntBASIC12.33□□□□□ -0.44
AP3S2P59780 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.33□□□□□ -0.44
AP3S2P59780 SPDYE14P-201ENST00000442619 822 ntBASIC12.33□□□□□ -0.44
AP3S2P59780 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.33□□□□□ -0.44
AP3S2P59780 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 RPL13AP23-201ENST00000480739 586 ntBASIC12.33□□□□□ -0.44
AP3S2P59780 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 AC138761.1-201ENST00000584393 385 ntBASIC12.33□□□□□ -0.44
AP3S2P59780 AL596442.2-201ENST00000610240 980 ntBASIC12.33□□□□□ -0.44
AP3S2P59780 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.33□□□□□ -0.44
AP3S2P59780 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.33□□□□□ -0.44
AP3S2P59780 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.33□□□□□ -0.44
AP3S2P59780 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.33□□□□□ -0.44
AP3S2P59780 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP3S2P59780 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.32□□□□□ -0.44
AP3S2P59780 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
AP3S2P59780 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 AL590440.2-201ENST00000641973 1595 ntBASIC12.32□□□□□ -0.44
AP3S2P59780 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 MRPL3P1-201ENST00000400109 1033 ntBASIC12.32□□□□□ -0.44
AP3S2P59780 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 RPL37AP1-201ENST00000412502 279 ntBASIC12.32□□□□□ -0.44
AP3S2P59780 MED15P5-201ENST00000423150 992 ntBASIC12.32□□□□□ -0.44
AP3S2P59780 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.32□□□□□ -0.44
AP3S2P59780 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.32□□□□□ -0.44
AP3S2P59780 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.32□□□□□ -0.44
AP3S2P59780 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.32□□□□□ -0.44
AP3S2P59780 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.32□□□□□ -0.44
AP3S2P59780 AL512361.1-201ENST00000554200 418 ntBASIC12.32□□□□□ -0.44
AP3S2P59780 AC027601.4-201ENST00000611259 610 ntBASIC12.32□□□□□ -0.44
AP3S2P59780 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.32□□□□□ -0.44
AP3S2P59780 AL158212.4-201ENST00000624062 1286 ntBASIC12.32□□□□□ -0.44
AP3S2P59780 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.32□□□□□ -0.44
AP3S2P59780 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
AP3S2P59780 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.32□□□□□ -0.44
AP3S2P59780 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP3S2P59780 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.32□□□□□ -0.44
AP3S2P59780 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms