Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RPL18P13-201ENST00000478088 569 ntBASIC13.38□□□□□ -0.27
PER3P56645 MESTP3-201ENST00000503460 968 ntBASIC13.38□□□□□ -0.27
PER3P56645 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.38□□□□□ -0.27
PER3P56645 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.38□□□□□ -0.27
PER3P56645 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.38□□□□□ -0.27
PER3P56645 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.38□□□□□ -0.27
PER3P56645 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.38□□□□□ -0.27
PER3P56645 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.38□□□□□ -0.27
PER3P56645 AC068587.8-201ENST00000641239 219 ntBASIC13.38□□□□□ -0.27
PER3P56645 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.38□□□□□ -0.27
PER3P56645 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.38□□□□□ -0.27
PER3P56645 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.38□□□□□ -0.27
PER3P56645 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.38□□□□□ -0.27
PER3P56645 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.38□□□□□ -0.27
PER3P56645 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PER3P56645 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PER3P56645 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PER3P56645 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.37□□□□□ -0.27
PER3P56645 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.37□□□□□ -0.27
PER3P56645 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 AC011474.4-201ENST00000623523 2076 ntBASIC13.37□□□□□ -0.27
PER3P56645 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.37□□□□□ -0.27
PER3P56645 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.37□□□□□ -0.27
PER3P56645 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.37□□□□□ -0.27
PER3P56645 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.37□□□□□ -0.27
PER3P56645 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.37□□□□□ -0.27
PER3P56645 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.37□□□□□ -0.27
PER3P56645 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.37□□□□□ -0.27
PER3P56645 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.37□□□□□ -0.27
PER3P56645 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.37□□□□□ -0.27
PER3P56645 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PER3P56645 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.37□□□□□ -0.27
PER3P56645 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
PER3P56645 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.37□□□□□ -0.27
PER3P56645 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.37□□□□□ -0.27
PER3P56645 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PER3P56645 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
PER3P56645 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.36□□□□□ -0.27
PER3P56645 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PER3P56645 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms