Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 AC072061.1-201ENST00000569710 2234 ntBASIC18.13■□□□□ 0.49
BRPF1P55201 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
BRPF1P55201 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC18.13■□□□□ 0.49
BRPF1P55201 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 BX679664.3-201ENST00000414070 555 ntBASIC18.13■□□□□ 0.49
BRPF1P55201 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.13■□□□□ 0.49
BRPF1P55201 AC113935.1-201ENST00000471722 555 ntBASIC18.13■□□□□ 0.49
BRPF1P55201 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.13■□□□□ 0.49
BRPF1P55201 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.13■□□□□ 0.49
BRPF1P55201 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.13■□□□□ 0.49
BRPF1P55201 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.13■□□□□ 0.49
BRPF1P55201 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.13■□□□□ 0.49
BRPF1P55201 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC18.13■□□□□ 0.49
BRPF1P55201 PHBP15-201ENST00000574228 665 ntBASIC18.13■□□□□ 0.49
BRPF1P55201 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.13■□□□□ 0.49
BRPF1P55201 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.13■□□□□ 0.49
BRPF1P55201 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.13■□□□□ 0.49
BRPF1P55201 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC18.13■□□□□ 0.49
BRPF1P55201 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18.13■□□□□ 0.49
BRPF1P55201 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.13■□□□□ 0.49
BRPF1P55201 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
BRPF1P55201 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
BRPF1P55201 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRPF1P55201 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.13■□□□□ 0.49
BRPF1P55201 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC18.12■□□□□ 0.49
BRPF1P55201 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 AC111170.3-201ENST00000624282 2464 ntBASIC18.12■□□□□ 0.49
BRPF1P55201 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.12■□□□□ 0.49
BRPF1P55201 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.12■□□□□ 0.49
BRPF1P55201 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 ACTG1P2-201ENST00000415776 1125 ntBASIC18.12■□□□□ 0.49
BRPF1P55201 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 ACTG1P11-201ENST00000425411 1125 ntBASIC18.12■□□□□ 0.49
BRPF1P55201 AC012618.1-201ENST00000461223 412 ntBASIC18.12■□□□□ 0.49
BRPF1P55201 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.12■□□□□ 0.49
BRPF1P55201 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.12■□□□□ 0.49
BRPF1P55201 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.12■□□□□ 0.49
BRPF1P55201 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
BRPF1P55201 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.12■□□□□ 0.49
BRPF1P55201 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
BRPF1P55201 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC18.12■□□□□ 0.49
BRPF1P55201 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRPF1P55201 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.12■□□□□ 0.49
BRPF1P55201 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 AC068760.1-201ENST00000493579 1953 ntBASIC18.11■□□□□ 0.49
BRPF1P55201 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 AC067931.2-201ENST00000623655 2003 ntBASIC18.11■□□□□ 0.49
BRPF1P55201 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC18.11■□□□□ 0.49
BRPF1P55201 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
BRPF1P55201 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC18.11■□□□□ 0.49
BRPF1P55201 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BRPF1P55201 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BRPF1P55201 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms