Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPT1AP50416 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.67■□□□□ 0.1
CPT1AP50416 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPT1AP50416 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPT1AP50416 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPT1AP50416 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CPT1AP50416 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 AC234644.1-201ENST00000406065 370 ntBASIC15.66■□□□□ 0.1
CPT1AP50416 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 ASS1P2-201ENST00000439895 1223 ntBASIC15.66■□□□□ 0.1
CPT1AP50416 VENTXP4-201ENST00000449029 958 ntBASIC15.66■□□□□ 0.1
CPT1AP50416 AC244197.1-201ENST00000456494 951 ntBASIC15.66■□□□□ 0.1
CPT1AP50416 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CPT1AP50416 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CPT1AP50416 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 AC104640.1-201ENST00000562617 2109 ntBASIC15.66■□□□□ 0.1
CPT1AP50416 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.66■□□□□ 0.1
CPT1AP50416 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.66■□□□□ 0.1
CPT1AP50416 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.66■□□□□ 0.1
CPT1AP50416 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.66■□□□□ 0.1
CPT1AP50416 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPT1AP50416 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPT1AP50416 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CPT1AP50416 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CPT1AP50416 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.65■□□□□ 0.1
CPT1AP50416 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CPT1AP50416 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.65■□□□□ 0.1
CPT1AP50416 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CPT1AP50416 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPT1AP50416 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.65■□□□□ 0.1
CPT1AP50416 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.65■□□□□ 0.1
CPT1AP50416 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPT1AP50416 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CPT1AP50416 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CPT1AP50416 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.65■□□□□ 0.1
CPT1AP50416 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.65■□□□□ 0.1
CPT1AP50416 KRT18P4-201ENST00000422599 1288 ntBASIC15.65■□□□□ 0.1
CPT1AP50416 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.65■□□□□ 0.1
CPT1AP50416 PSAT1P2-201ENST00000426107 972 ntBASIC15.65■□□□□ 0.1
CPT1AP50416 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.65■□□□□ 0.1
CPT1AP50416 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.65■□□□□ 0.1
CPT1AP50416 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 AC026470.1-201ENST00000478038 846 ntBASIC15.65■□□□□ 0.1
CPT1AP50416 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.65■□□□□ 0.1
CPT1AP50416 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.65■□□□□ 0.1
CPT1AP50416 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.65■□□□□ 0.1
CPT1AP50416 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.65■□□□□ 0.1
CPT1AP50416 CYP4F36P-201ENST00000589193 186 ntBASIC15.65■□□□□ 0.1
CPT1AP50416 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 AL031673.1-201ENST00000611460 466 ntBASIC15.65■□□□□ 0.1
CPT1AP50416 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.65■□□□□ 0.1
CPT1AP50416 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPT1AP50416 AC117503.4-201ENST00000623229 1418 ntBASIC15.65■□□□□ 0.1
CPT1AP50416 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms