Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.78□□□□□ -0.52
NKX2-1P43699 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 AL445250.1-201ENST00000641671 2259 ntBASIC11.78□□□□□ -0.52
NKX2-1P43699 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 INTS4P2-202ENST00000614726 2019 ntBASIC11.78□□□□□ -0.52
NKX2-1P43699 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.78□□□□□ -0.52
NKX2-1P43699 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.78□□□□□ -0.52
NKX2-1P43699 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.78□□□□□ -0.52
NKX2-1P43699 AC107890.1-201ENST00000422478 521 ntBASIC11.78□□□□□ -0.52
NKX2-1P43699 AC134915.1-201ENST00000426461 574 ntBASIC11.78□□□□□ -0.52
NKX2-1P43699 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.78□□□□□ -0.52
NKX2-1P43699 AL161932.2-201ENST00000435436 679 ntBASIC11.78□□□□□ -0.52
NKX2-1P43699 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.78□□□□□ -0.52
NKX2-1P43699 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.78□□□□□ -0.52
NKX2-1P43699 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.78□□□□□ -0.52
NKX2-1P43699 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.78□□□□□ -0.52
NKX2-1P43699 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.78□□□□□ -0.52
NKX2-1P43699 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.78□□□□□ -0.52
NKX2-1P43699 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.78□□□□□ -0.52
NKX2-1P43699 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.78□□□□□ -0.52
NKX2-1P43699 AC139530.3-201ENST00000620344 690 ntBASIC11.78□□□□□ -0.52
NKX2-1P43699 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.78□□□□□ -0.52
NKX2-1P43699 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.78□□□□□ -0.52
NKX2-1P43699 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NKX2-1P43699 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.78□□□□□ -0.52
NKX2-1P43699 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
NKX2-1P43699 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.78□□□□□ -0.52
NKX2-1P43699 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
NKX2-1P43699 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
NKX2-1P43699 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.78□□□□□ -0.52
NKX2-1P43699 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NKX2-1P43699 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NKX2-1P43699 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
NKX2-1P43699 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.77□□□□□ -0.52
NKX2-1P43699 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.77□□□□□ -0.52
NKX2-1P43699 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.77□□□□□ -0.52
NKX2-1P43699 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 AC005014.1-201ENST00000432006 2976 ntBASIC11.77□□□□□ -0.52
NKX2-1P43699 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
NKX2-1P43699 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
NKX2-1P43699 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NKX2-1P43699 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-1P43699 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-1P43699 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-1P43699 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
NKX2-1P43699 ARSEP1-201ENST00000420443 635 ntBASIC11.77□□□□□ -0.53
NKX2-1P43699 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.77□□□□□ -0.53
NKX2-1P43699 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NKX2-1P43699 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.77□□□□□ -0.53
NKX2-1P43699 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.77□□□□□ -0.53
NKX2-1P43699 AC120045.2-201ENST00000567334 178 ntBASIC11.77□□□□□ -0.53
NKX2-1P43699 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.77□□□□□ -0.53
NKX2-1P43699 AC004466.1-201ENST00000599515 1080 ntBASIC11.77□□□□□ -0.53
NKX2-1P43699 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.77□□□□□ -0.53
NKX2-1P43699 AC138696.2-201ENST00000607376 223 ntBASIC11.77□□□□□ -0.53
NKX2-1P43699 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms