Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NR4A2P43354 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
NR4A2P43354 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.13□□□□□ -0.31
NR4A2P43354 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.13□□□□□ -0.31
NR4A2P43354 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
NR4A2P43354 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NR4A2P43354 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 AC145098.2-201ENST00000623593 3026 ntBASIC13.12□□□□□ -0.31
NR4A2P43354 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NR4A2P43354 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.12□□□□□ -0.31
NR4A2P43354 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.12□□□□□ -0.31
NR4A2P43354 KRT18P43-201ENST00000469825 1281 ntBASIC13.12□□□□□ -0.31
NR4A2P43354 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 AP001889.1-201ENST00000525414 633 ntBASIC13.12□□□□□ -0.31
NR4A2P43354 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.12□□□□□ -0.31
NR4A2P43354 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.12□□□□□ -0.31
NR4A2P43354 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.12□□□□□ -0.31
NR4A2P43354 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.12□□□□□ -0.31
NR4A2P43354 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.12□□□□□ -0.31
NR4A2P43354 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
NR4A2P43354 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 AP000437.1-201ENST00000624057 2085 ntBASIC13.12□□□□□ -0.31
NR4A2P43354 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NR4A2P43354 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NR4A2P43354 AC093525.8-201ENST00000624099 1342 ntBASIC13.12□□□□□ -0.31
NR4A2P43354 MEX3B-202ENST00000558133 4333 ntBASIC13.12□□□□□ -0.31
NR4A2P43354 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NR4A2P43354 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A2P43354 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A2P43354 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
NR4A2P43354 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.11□□□□□ -0.31
NR4A2P43354 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
NR4A2P43354 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NR4A2P43354 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NR4A2P43354 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NR4A2P43354 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A2P43354 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.11□□□□□ -0.31
NR4A2P43354 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms