Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MTHFRP42898 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MTHFRP42898 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
MTHFRP42898 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.92□□□□□ -0.02
MTHFRP42898 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MTHFRP42898 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.92□□□□□ -0.02
MTHFRP42898 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.92□□□□□ -0.02
MTHFRP42898 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MTHFRP42898 RNVU1-8-201ENST00000364272 125 ntBASIC14.92□□□□□ -0.02
MTHFRP42898 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.92□□□□□ -0.02
MTHFRP42898 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 MIR1301-201ENST00000408518 82 ntBASIC14.92□□□□□ -0.02
MTHFRP42898 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MTHFRP42898 RN7SL582P-201ENST00000491078 279 ntBASIC14.92□□□□□ -0.02
MTHFRP42898 RN7SL564P-201ENST00000496309 250 ntBASIC14.92□□□□□ -0.02
MTHFRP42898 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.92□□□□□ -0.02
MTHFRP42898 SNORD3B-1-201ENST00000577988 758 ntBASIC14.92□□□□□ -0.02
MTHFRP42898 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.92□□□□□ -0.02
MTHFRP42898 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.92□□□□□ -0.02
MTHFRP42898 AC010632.2-201ENST00000588369 1224 ntBASIC14.92□□□□□ -0.02
MTHFRP42898 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MTHFRP42898 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.92□□□□□ -0.02
MTHFRP42898 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MTHFRP42898 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
MTHFRP42898 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
MTHFRP42898 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.91□□□□□ -0.02
MTHFRP42898 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.91□□□□□ -0.02
MTHFRP42898 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.91□□□□□ -0.02
MTHFRP42898 AC063952.3-201ENST00000467756 308 ntBASIC14.91□□□□□ -0.02
MTHFRP42898 AC093826.1-201ENST00000508655 993 ntBASIC14.91□□□□□ -0.02
MTHFRP42898 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MTHFRP42898 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.91□□□□□ -0.02
MTHFRP42898 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.91□□□□□ -0.02
MTHFRP42898 GOLGA2P7-209ENST00000560408 745 ntBASIC14.91□□□□□ -0.02
MTHFRP42898 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.91□□□□□ -0.02
MTHFRP42898 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MTHFRP42898 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 FGD5P1-202ENST00000614866 2498 ntBASIC14.91□□□□□ -0.02
MTHFRP42898 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MTHFRP42898 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.91□□□□□ -0.02
MTHFRP42898 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.91□□□□□ -0.02
MTHFRP42898 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MTHFRP42898 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MTHFRP42898 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MTHFRP42898 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms