Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC5P40937 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RFC5P40937 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC5P40937 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RFC5P40937 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RFC5P40937 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC5P40937 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 AC152010.1-201ENST00000415779 2006 ntBASIC15.74■□□□□ 0.11
RFC5P40937 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RFC5P40937 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.74■□□□□ 0.11
RFC5P40937 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 AC092506.1-202ENST00000401022 528 ntBASIC15.74■□□□□ 0.11
RFC5P40937 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.74■□□□□ 0.11
RFC5P40937 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 TMEM198B-204ENST00000484016 896 ntBASIC15.74■□□□□ 0.11
RFC5P40937 RPL18AP8-201ENST00000486071 528 ntBASIC15.74■□□□□ 0.11
RFC5P40937 AC005740.1-201ENST00000515639 522 ntBASIC15.74■□□□□ 0.11
RFC5P40937 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.74■□□□□ 0.11
RFC5P40937 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.74■□□□□ 0.11
RFC5P40937 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.74■□□□□ 0.11
RFC5P40937 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.74■□□□□ 0.11
RFC5P40937 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.74■□□□□ 0.11
RFC5P40937 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC5P40937 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.74■□□□□ 0.11
RFC5P40937 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC5P40937 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 AC067931.2-201ENST00000623655 2003 ntBASIC15.73■□□□□ 0.11
RFC5P40937 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.73■□□□□ 0.11
RFC5P40937 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.73■□□□□ 0.11
RFC5P40937 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.73■□□□□ 0.11
RFC5P40937 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
RFC5P40937 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RFC5P40937 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.73■□□□□ 0.11
RFC5P40937 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.73■□□□□ 0.11
RFC5P40937 FGFR3P1-201ENST00000449999 601 ntBASIC15.73■□□□□ 0.11
RFC5P40937 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.73■□□□□ 0.11
RFC5P40937 CHCHD2P9-201ENST00000461726 456 ntBASIC15.73■□□□□ 0.11
RFC5P40937 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 AC130709.1-201ENST00000484779 1212 ntBASIC15.73■□□□□ 0.11
RFC5P40937 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms