Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC18.11■□□□□ 0.49
RXRBP28702 TBC1D3P1-201ENST00000590047 1693 ntBASIC18.11■□□□□ 0.49
RXRBP28702 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RXRBP28702 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RXRBP28702 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RXRBP28702 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RXRBP28702 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RXRBP28702 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RXRBP28702 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RXRBP28702 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RXRBP28702 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RXRBP28702 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RXRBP28702 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.1■□□□□ 0.49
RXRBP28702 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 EEF1GP3-201ENST00000421044 1288 ntBASIC18.1■□□□□ 0.49
RXRBP28702 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC18.1■□□□□ 0.49
RXRBP28702 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
RXRBP28702 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
RXRBP28702 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RXRBP28702 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RXRBP28702 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RXRBP28702 AC002350.2-201ENST00000623894 1828 ntBASIC18.09■□□□□ 0.49
RXRBP28702 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RXRBP28702 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC18.09■□□□□ 0.49
RXRBP28702 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RXRBP28702 AC004884.1-201ENST00000393647 319 ntBASIC18.09■□□□□ 0.49
RXRBP28702 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC18.09■□□□□ 0.49
RXRBP28702 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC18.09■□□□□ 0.49
RXRBP28702 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC18.09■□□□□ 0.49
RXRBP28702 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC18.09■□□□□ 0.49
RXRBP28702 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC18.09■□□□□ 0.49
RXRBP28702 AC103810.4-201ENST00000578601 257 ntBASIC18.09■□□□□ 0.49
RXRBP28702 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC18.09■□□□□ 0.49
RXRBP28702 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RXRBP28702 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RXRBP28702 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RXRBP28702 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RXRBP28702 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC18.09■□□□□ 0.49
RXRBP28702 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.09■□□□□ 0.49
RXRBP28702 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RXRBP28702 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RXRBP28702 AC232323.1-201ENST00000540724 2099 ntBASIC18.08■□□□□ 0.49
RXRBP28702 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RXRBP28702 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RXRBP28702 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.08■□□□□ 0.49
RXRBP28702 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RXRBP28702 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
RXRBP28702 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RXRBP28702 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RXRBP28702 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC18.08■□□□□ 0.48
RXRBP28702 MTHFD2P7-201ENST00000483867 983 ntBASIC18.08■□□□□ 0.48
RXRBP28702 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC18.08■□□□□ 0.48
RXRBP28702 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC18.08■□□□□ 0.48
RXRBP28702 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms