Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1EP28566 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HTR1EP28566 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HTR1EP28566 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HTR1EP28566 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.78□□□□□ -0.2
HTR1EP28566 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1EP28566 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1EP28566 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1EP28566 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HTR1EP28566 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR1EP28566 BEND3P3-201ENST00000611030 2440 ntBASIC13.78□□□□□ -0.2
HTR1EP28566 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR1EP28566 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HTR1EP28566 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1EP28566 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
HTR1EP28566 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1EP28566 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
HTR1EP28566 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1EP28566 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
HTR1EP28566 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
HTR1EP28566 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.77□□□□□ -0.2
HTR1EP28566 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1EP28566 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR1EP28566 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.77□□□□□ -0.2
HTR1EP28566 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.77□□□□□ -0.21
HTR1EP28566 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HTR1EP28566 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
HTR1EP28566 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HTR1EP28566 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
HTR1EP28566 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HTR1EP28566 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.77□□□□□ -0.21
HTR1EP28566 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 AC022137.2-201ENST00000503482 481 ntBASIC13.77□□□□□ -0.21
HTR1EP28566 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.77□□□□□ -0.21
HTR1EP28566 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.77□□□□□ -0.21
HTR1EP28566 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
HTR1EP28566 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
HTR1EP28566 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR1EP28566 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR1EP28566 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 ACTG1P17-201ENST00000558391 1119 ntBASIC13.77□□□□□ -0.21
HTR1EP28566 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 GNRHR2-203ENST00000581100 1187 ntBASIC13.77□□□□□ -0.21
HTR1EP28566 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.77□□□□□ -0.21
HTR1EP28566 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HTR1EP28566 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
HTR1EP28566 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.77□□□□□ -0.21
HTR1EP28566 AP005019.2-201ENST00000615104 511 ntBASIC13.77□□□□□ -0.21
HTR1EP28566 AL008638.5-201ENST00000623814 1298 ntBASIC13.77□□□□□ -0.21
HTR1EP28566 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
HTR1EP28566 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR1EP28566 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HTR1EP28566 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
HTR1EP28566 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HTR1EP28566 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HTR1EP28566 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HTR1EP28566 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HTR1EP28566 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HTR1EP28566 USP17L6P-201ENST00000382470 1197 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms