Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.19■□□□□ 0.34
NCLP19338 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NCLP19338 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.19■□□□□ 0.34
NCLP19338 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.19■□□□□ 0.34
NCLP19338 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NCLP19338 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.19■□□□□ 0.34
NCLP19338 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NCLP19338 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
NCLP19338 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.18■□□□□ 0.34
NCLP19338 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.18■□□□□ 0.34
NCLP19338 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NCLP19338 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NCLP19338 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
NCLP19338 ARSEP1-201ENST00000420443 635 ntBASIC17.18■□□□□ 0.34
NCLP19338 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 AC134915.1-201ENST00000426461 574 ntBASIC17.18■□□□□ 0.34
NCLP19338 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.18■□□□□ 0.34
NCLP19338 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NCLP19338 GPR53P-205ENST00000457298 1084 ntBASIC17.18■□□□□ 0.34
NCLP19338 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.18■□□□□ 0.34
NCLP19338 AC120045.2-201ENST00000567334 178 ntBASIC17.18■□□□□ 0.34
NCLP19338 AC106886.1-201ENST00000568660 600 ntBASIC17.18■□□□□ 0.34
NCLP19338 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.18■□□□□ 0.34
NCLP19338 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
NCLP19338 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.18■□□□□ 0.34
NCLP19338 MIR6074-201ENST00000612054 107 ntBASIC17.18■□□□□ 0.34
NCLP19338 AL162274.1-201ENST00000617191 1098 ntBASIC17.18■□□□□ 0.34
NCLP19338 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.18■□□□□ 0.34
NCLP19338 PRSS30P-206ENST00000641773 873 ntBASIC17.18■□□□□ 0.34
NCLP19338 AC215219.1-201ENST00000400706 1817 ntBASIC17.18■□□□□ 0.34
NCLP19338 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC17.18■□□□□ 0.34
NCLP19338 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NCLP19338 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NCLP19338 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 AL157996.1-201ENST00000624684 2299 ntBASIC17.18■□□□□ 0.34
NCLP19338 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NCLP19338 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.18■□□□□ 0.34
NCLP19338 AC015688.4-201ENST00000580780 1647 ntBASIC17.18■□□□□ 0.34
NCLP19338 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NCLP19338 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 AC114271.1-201ENST00000612689 2813 ntBASIC17.17■□□□□ 0.34
NCLP19338 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
NCLP19338 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NCLP19338 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
NCLP19338 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.17■□□□□ 0.34
NCLP19338 C1QBPP1-201ENST00000400117 770 ntBASIC17.17■□□□□ 0.34
NCLP19338 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.17■□□□□ 0.34
NCLP19338 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.17■□□□□ 0.34
NCLP19338 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.17■□□□□ 0.34
NCLP19338 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.17■□□□□ 0.34
NCLP19338 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.17■□□□□ 0.34
NCLP19338 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.17■□□□□ 0.34
NCLP19338 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.17■□□□□ 0.34
NCLP19338 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.17■□□□□ 0.34
NCLP19338 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.17■□□□□ 0.34
NCLP19338 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NCLP19338 AL033527.5-201ENST00000641382 801 ntBASIC17.17■□□□□ 0.34
NCLP19338 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
NCLP19338 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NCLP19338 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.17■□□□□ 0.34
NCLP19338 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NCLP19338 AC068760.1-201ENST00000493579 1953 ntBASIC17.17■□□□□ 0.34
NCLP19338 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.17■□□□□ 0.34
NCLP19338 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms