Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ARSEP1-201ENST00000420443 635 ntBASIC12.61□□□□□ -0.39
ATF1P18846 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 AL161932.2-201ENST00000435436 679 ntBASIC12.61□□□□□ -0.39
ATF1P18846 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.61□□□□□ -0.39
ATF1P18846 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.61□□□□□ -0.39
ATF1P18846 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.61□□□□□ -0.39
ATF1P18846 AC132938.4-201ENST00000623835 848 ntBASIC12.61□□□□□ -0.39
ATF1P18846 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.61□□□□□ -0.39
ATF1P18846 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.61□□□□□ -0.39
ATF1P18846 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ATF1P18846 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ATF1P18846 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ATF1P18846 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.61□□□□□ -0.39
ATF1P18846 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 DLX4-206ENST00000611342 1662 ntBASIC12.61□□□□□ -0.39
ATF1P18846 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATF1P18846 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.61□□□□□ -0.39
ATF1P18846 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ATF1P18846 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.6□□□□□ -0.39
ATF1P18846 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 AC024075.2-201ENST00000598112 1473 ntBASIC12.6□□□□□ -0.39
ATF1P18846 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 AC009093.2-202ENST00000620513 2079 ntBASIC12.6□□□□□ -0.39
ATF1P18846 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.6□□□□□ -0.39
ATF1P18846 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 LINC00567-201ENST00000569854 3409 ntBASIC12.6□□□□□ -0.39
ATF1P18846 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
ATF1P18846 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 AC027237.1-201ENST00000560942 655 ntBASIC12.6□□□□□ -0.39
ATF1P18846 AC106820.3-201ENST00000561653 397 ntBASIC12.6□□□□□ -0.39
ATF1P18846 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.6□□□□□ -0.39
ATF1P18846 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.6□□□□□ -0.39
ATF1P18846 AC010319.3-201ENST00000597028 470 ntBASIC12.6□□□□□ -0.39
ATF1P18846 AC104506.1-201ENST00000609247 429 ntBASIC12.6□□□□□ -0.39
ATF1P18846 AC004623.1-201ENST00000624592 2127 ntBASIC12.6□□□□□ -0.39
ATF1P18846 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.6□□□□□ -0.39
ATF1P18846 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.6□□□□□ -0.39
ATF1P18846 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.6□□□□□ -0.39
ATF1P18846 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ATF1P18846 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.6□□□□□ -0.39
ATF1P18846 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATF1P18846 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ATF1P18846 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATF1P18846 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms