Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AC079781.4-201ENST00000641908 219 ntBASIC13.09□□□□□ -0.31
HTR1AP08908 TRIM80P-201ENST00000455685 2848 ntBASIC13.09□□□□□ -0.31
HTR1AP08908 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
HTR1AP08908 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.09□□□□□ -0.31
HTR1AP08908 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.09□□□□□ -0.31
HTR1AP08908 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 AL645937.6-201ENST00000641122 3727 ntBASIC13.09□□□□□ -0.31
HTR1AP08908 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.09□□□□□ -0.31
HTR1AP08908 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HTR1AP08908 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HTR1AP08908 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
HTR1AP08908 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.08□□□□□ -0.31
HTR1AP08908 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.08□□□□□ -0.31
HTR1AP08908 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HTR1AP08908 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
HTR1AP08908 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 RNU1-114P-201ENST00000365297 166 ntBASIC13.08□□□□□ -0.32
HTR1AP08908 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.08□□□□□ -0.32
HTR1AP08908 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.08□□□□□ -0.32
HTR1AP08908 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 TPRX2P-201ENST00000535362 881 ntBASIC13.08□□□□□ -0.32
HTR1AP08908 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
HTR1AP08908 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.08□□□□□ -0.32
HTR1AP08908 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.08□□□□□ -0.32
HTR1AP08908 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 MIR193BHG-211ENST00000641433 5365 ntBASIC13.08□□□□□ -0.32
HTR1AP08908 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 FP325330.2-201ENST00000624219 5630 ntBASIC13.08□□□□□ -0.32
HTR1AP08908 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HTR1AP08908 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.08□□□□□ -0.32
HTR1AP08908 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HTR1AP08908 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 MEX3B-202ENST00000558133 4333 ntBASIC13.07□□□□□ -0.32
HTR1AP08908 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HTR1AP08908 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HTR1AP08908 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HTR1AP08908 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
HTR1AP08908 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR1AP08908 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR1AP08908 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 AC022364.1-202ENST00000617468 2409 ntBASIC13.07□□□□□ -0.32
HTR1AP08908 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HTR1AP08908 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR1AP08908 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.07□□□□□ -0.32
HTR1AP08908 AC134915.1-201ENST00000426461 574 ntBASIC13.07□□□□□ -0.32
HTR1AP08908 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HTR1AP08908 AC114812.1-204ENST00000449669 728 ntBASIC13.07□□□□□ -0.32
HTR1AP08908 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.07□□□□□ -0.32
HTR1AP08908 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.07□□□□□ -0.32
HTR1AP08908 AP001582.1-201ENST00000525856 295 ntBASIC13.07□□□□□ -0.32
HTR1AP08908 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms