Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPNS1P04632 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPNS1P04632 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CAPNS1P04632 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.27□□□□□ -0.12
CAPNS1P04632 LILRP1-201ENST00000444199 1370 ntBASIC14.27□□□□□ -0.12
CAPNS1P04632 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CAPNS1P04632 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPNS1P04632 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.27□□□□□ -0.13
CAPNS1P04632 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.27□□□□□ -0.13
CAPNS1P04632 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPNS1P04632 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CAPNS1P04632 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.27□□□□□ -0.13
CAPNS1P04632 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPNS1P04632 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.27□□□□□ -0.13
CAPNS1P04632 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPNS1P04632 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.27□□□□□ -0.13
CAPNS1P04632 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.27□□□□□ -0.13
CAPNS1P04632 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.27□□□□□ -0.13
CAPNS1P04632 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.27□□□□□ -0.13
CAPNS1P04632 AC138466.4-201ENST00000623965 852 ntBASIC14.27□□□□□ -0.13
CAPNS1P04632 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC14.27□□□□□ -0.13
CAPNS1P04632 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPNS1P04632 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CAPNS1P04632 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CAPNS1P04632 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
CAPNS1P04632 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPNS1P04632 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CAPNS1P04632 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.27□□□□□ -0.13
CAPNS1P04632 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CAPNS1P04632 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CAPNS1P04632 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPNS1P04632 BEND3P3-201ENST00000611030 2440 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPNS1P04632 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPNS1P04632 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CAPNS1P04632 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPNS1P04632 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CAPNS1P04632 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPNS1P04632 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 AP000356.3-201ENST00000382243 753 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CAPNS1P04632 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 VDAC1P1-201ENST00000439229 848 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 RCC2P8-201ENST00000502779 1035 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPNS1P04632 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CAPNS1P04632 AC012158.2-201ENST00000536546 354 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 AL118516.1-201ENST00000564152 670 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPNS1P04632 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPNS1P04632 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.26□□□□□ -0.13
CAPNS1P04632 EIF5AP2-201ENST00000585668 1047 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 AC007881.3-201ENST00000608897 607 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 AC138466.3-201ENST00000619983 221 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 AC244250.3-201ENST00000620749 366 ntBASIC14.26□□□□□ -0.13
CAPNS1P04632 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPNS1P04632 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CAPNS1P04632 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CAPNS1P04632 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.26□□□□□ -0.13
CAPNS1P04632 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.26□□□□□ -0.13
CAPNS1P04632 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CAPNS1P04632 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CAPNS1P04632 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CAPNS1P04632 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CAPNS1P04632 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CAPNS1P04632 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms