Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.06□□□□□ -0.48
GAPDHP04406 AL035252.4-201ENST00000624174 288 ntBASIC12.06□□□□□ -0.48
GAPDHP04406 RHOXF1P1-202ENST00000635473 501 ntBASIC12.06□□□□□ -0.48
GAPDHP04406 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
GAPDHP04406 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GAPDHP04406 PCDHA5-203ENST00000614258 4248 ntBASIC12.06□□□□□ -0.48
GAPDHP04406 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.06□□□□□ -0.48
GAPDHP04406 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.06□□□□□ -0.48
GAPDHP04406 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.06□□□□□ -0.48
GAPDHP04406 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
GAPDHP04406 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GAPDHP04406 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GAPDHP04406 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 AC006001.1-201ENST00000325130 474 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 AC136604.1-202ENST00000425471 771 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.05□□□□□ -0.48
GAPDHP04406 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.05□□□□□ -0.48
GAPDHP04406 RPL7P3-201ENST00000441388 714 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 KLF2P4-201ENST00000451959 1225 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 AL590640.2-201ENST00000457038 527 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 GCOM2-201ENST00000509133 1104 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 AC106820.3-201ENST00000561653 397 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
GAPDHP04406 BX088702.1-201ENST00000610784 235 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 AHCYP2-201ENST00000430630 1300 ntBASIC12.05□□□□□ -0.48
GAPDHP04406 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.05□□□□□ -0.48
GAPDHP04406 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
GAPDHP04406 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.05□□□□□ -0.48
GAPDHP04406 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GAPDHP04406 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.05□□□□□ -0.48
GAPDHP04406 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GAPDHP04406 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.04□□□□□ -0.48
GAPDHP04406 AP000437.1-201ENST00000624057 2085 ntBASIC12.04□□□□□ -0.48
GAPDHP04406 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms