Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
IFNA1P01562 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
IFNA1P01562 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
IFNA1P01562 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 MXRA5Y-201ENST00000420610 8000 ntBASIC11.36□□□□□ -0.59
IFNA1P01562 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
IFNA1P01562 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
IFNA1P01562 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
IFNA1P01562 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
IFNA1P01562 UPK3BP1-201ENST00000428678 509 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.35□□□□□ -0.59
IFNA1P01562 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.35□□□□□ -0.59
IFNA1P01562 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.35□□□□□ -0.59
IFNA1P01562 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.35□□□□□ -0.59
IFNA1P01562 AC131206.1-201ENST00000538078 1211 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
IFNA1P01562 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.35□□□□□ -0.59
IFNA1P01562 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 AL133215.2-201ENST00000609242 977 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 MIR7706-201ENST00000613747 67 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 AL773604.1-201ENST00000617417 272 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 AC091812.2-201ENST00000619081 385 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 AC148477.8-201ENST00000624298 468 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 AC105339.1-204ENST00000636249 355 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 AC084121.4-201ENST00000641598 221 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 AF228730.8-201ENST00000642140 221 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 AC003102.2-201ENST00000589195 1469 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.35□□□□□ -0.59
IFNA1P01562 AC110048.1-201ENST00000604293 2157 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.35□□□□□ -0.59
IFNA1P01562 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.35□□□□□ -0.59
IFNA1P01562 AC134407.3-201ENST00000624035 2139 ntBASIC11.35□□□□□ -0.59
IFNA1P01562 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
IFNA1P01562 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
IFNA1P01562 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.34□□□□□ -0.59
IFNA1P01562 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 LINC02486-201ENST00000604157 3000 ntBASIC11.34□□□□□ -0.59
IFNA1P01562 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms