Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZIC3O60481 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 AC091046.1-201ENST00000331871 207 ntBASIC12.81□□□□□ -0.36
ZIC3O60481 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.81□□□□□ -0.36
ZIC3O60481 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZIC3O60481 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.81□□□□□ -0.36
ZIC3O60481 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.81□□□□□ -0.36
ZIC3O60481 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.81□□□□□ -0.36
ZIC3O60481 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
ZIC3O60481 AC079328.1-201ENST00000560358 952 ntBASIC12.81□□□□□ -0.36
ZIC3O60481 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.81□□□□□ -0.36
ZIC3O60481 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.81□□□□□ -0.36
ZIC3O60481 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.81□□□□□ -0.36
ZIC3O60481 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 AC016629.1-201ENST00000596579 586 ntBASIC12.81□□□□□ -0.36
ZIC3O60481 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC3O60481 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZIC3O60481 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
ZIC3O60481 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZIC3O60481 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC3O60481 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC3O60481 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC3O60481 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZIC3O60481 AC097376.2-205ENST00000610159 5334 ntBASIC12.81□□□□□ -0.36
ZIC3O60481 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.8□□□□□ -0.36
ZIC3O60481 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.8□□□□□ -0.36
ZIC3O60481 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 MAGEA5-201ENST00000446757 942 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.8□□□□□ -0.36
ZIC3O60481 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 NDUFS6P1-201ENST00000485187 316 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 RPL18AP8-201ENST00000486071 528 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 AC019193.1-201ENST00000506678 823 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 PRKXP1-201ENST00000561423 1122 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.8□□□□□ -0.36
ZIC3O60481 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.8□□□□□ -0.36
ZIC3O60481 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.8□□□□□ -0.36
ZIC3O60481 AC103810.10-201ENST00000606504 343 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 AC103691.2-201ENST00000618824 433 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 AC051619.9-201ENST00000623237 597 ntBASIC12.8□□□□□ -0.36
ZIC3O60481 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC3O60481 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC3O60481 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
ZIC3O60481 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms