Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 MIR33B-201ENST00000385104 96 ntBASIC14.37□□□□□ -0.11
SMAD6O43541 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SMAD6O43541 BX679664.3-201ENST00000414070 555 ntBASIC14.37□□□□□ -0.11
SMAD6O43541 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.37□□□□□ -0.11
SMAD6O43541 AC113935.1-201ENST00000471722 555 ntBASIC14.37□□□□□ -0.11
SMAD6O43541 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.37□□□□□ -0.11
SMAD6O43541 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.37□□□□□ -0.11
SMAD6O43541 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
SMAD6O43541 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.37□□□□□ -0.11
SMAD6O43541 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.37□□□□□ -0.11
SMAD6O43541 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.37□□□□□ -0.11
SMAD6O43541 AC009145.4-201ENST00000625119 1294 ntBASIC14.37□□□□□ -0.11
SMAD6O43541 AL805961.1-201ENST00000642026 753 ntBASIC14.37□□□□□ -0.11
SMAD6O43541 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.37□□□□□ -0.11
SMAD6O43541 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
SMAD6O43541 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.37□□□□□ -0.11
SMAD6O43541 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMAD6O43541 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.37□□□□□ -0.11
SMAD6O43541 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
SMAD6O43541 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SMAD6O43541 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.36□□□□□ -0.11
SMAD6O43541 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 AC092506.1-202ENST00000401022 528 ntBASIC14.36□□□□□ -0.11
SMAD6O43541 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 TMEM198B-204ENST00000484016 896 ntBASIC14.36□□□□□ -0.11
SMAD6O43541 GOLGA2P8-201ENST00000505201 779 ntBASIC14.36□□□□□ -0.11
SMAD6O43541 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 MIR4706-201ENST00000582134 82 ntBASIC14.36□□□□□ -0.11
SMAD6O43541 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.36□□□□□ -0.11
SMAD6O43541 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.36□□□□□ -0.11
SMAD6O43541 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SMAD6O43541 YRDCP1-201ENST00000621419 643 ntBASIC14.36□□□□□ -0.11
SMAD6O43541 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.36□□□□□ -0.11
SMAD6O43541 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SMAD6O43541 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.36□□□□□ -0.11
SMAD6O43541 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 AC074138.1-201ENST00000611182 1303 ntBASIC14.36□□□□□ -0.11
SMAD6O43541 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMAD6O43541 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.35□□□□□ -0.11
SMAD6O43541 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.35□□□□□ -0.11
SMAD6O43541 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMAD6O43541 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms