Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPB4C9JG80 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 LINC02486-201ENST00000604157 3000 ntBASIC12.6□□□□□ -0.39
NPIPB4C9JG80 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 SBF1P1-201ENST00000444527 5631 ntBASIC12.6□□□□□ -0.39
NPIPB4C9JG80 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 PFN1P12-201ENST00000455938 534 ntBASIC12.6□□□□□ -0.39
NPIPB4C9JG80 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 KRT8P1-201ENST00000557533 1207 ntBASIC12.6□□□□□ -0.39
NPIPB4C9JG80 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 AL139424.3-202ENST00000641619 917 ntBASIC12.6□□□□□ -0.39
NPIPB4C9JG80 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPB4C9JG80 AC020917.4-201ENST00000623994 1999 ntBASIC12.6□□□□□ -0.39
NPIPB4C9JG80 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 RN7SKP214-201ENST00000364208 315 ntBASIC12.59□□□□□ -0.39
NPIPB4C9JG80 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
NPIPB4C9JG80 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms