Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 AC091544.8-201ENST00000619490 361 ntBASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 AC148477.9-201ENST00000623974 539 ntBASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAI2Q9Y5P3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 ST20-AS1-201ENST00000560255 4223 ntBASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 MIR3188-201ENST00000583494 85 ntBASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 AL928921.2-201ENST00000641325 2442 ntBASIC14.49□□□□□ -0.09
RAI2Q9Y5P3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 NUP210P1-202ENST00000504322 710 ntBASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 AC090857.1-201ENST00000527400 390 ntBASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 AL512310.5-201ENST00000551999 515 ntBASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms