Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TUBB1P2-201ENST00000422712 1306 ntBASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 TUBB1P1-201ENST00000503144 1300 ntBASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 TMBIM7P-202ENST00000641474 1516 ntBASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 USP9YP28-201ENST00000435142 589 ntBASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AL645933.1-201ENST00000440087 609 ntBASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 GOLGA2P4-201ENST00000441462 777 ntBASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 FAM86HP-204ENST00000513466 959 ntBASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 CARD8-224ENST00000522431 622 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AC020923.1-201ENST00000624021 917 ntBASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 CU459211.1-201ENST00000635667 749 ntBASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB13Q9Y5F0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB13Q9Y5F0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 OR6K3-202ENST00000368146 996 ntBASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB13Q9Y5F0 VN1R110P-201ENST00000438988 971 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms