Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 HMGA1P1-201ENST00000415560 1062 ntBASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 AL354861.1-201ENST00000445213 355 ntBASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 SCARNA12-201ENST00000459155 270 ntBASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 OR5BD1P-201ENST00000532527 817 ntBASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TUBB8P4-201ENST00000511806 1324 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 PYY2-201ENST00000315776 282 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 AC095040.1-201ENST00000513286 675 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 RN7SL455P-201ENST00000580629 282 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 RN7SL470P-201ENST00000583069 259 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 AP000322.3-201ENST00000608665 388 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 MIR6727-201ENST00000620702 65 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 AL136379.1-201ENST00000623471 2642 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 AC099063.4-201ENST00000641099 1602 ntBASIC17.21■□□□□ 0.35
DENND2AQ9ULE3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
DENND2AQ9ULE3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.21■□□□□ 0.34
DENND2AQ9ULE3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
DENND2AQ9ULE3 AL590824.1-201ENST00000403828 1349 ntBASIC17.21■□□□□ 0.34
DENND2AQ9ULE3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms